PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN11390.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 384aa    MW: 42197.1 Da    PI: 7.964
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN11390.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS325.41.1e-9923787374
        GRAS   7 ecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppse........tseknsseelaalklfsevsPilkfs 94 
                 ++Aea++  ++   la+ +L rl+el+sp++ ++m+Rlaayft AL+  l +  +  +   ++++         +e++++++laa++l++++sP++kf+
  PIN11390.1   2 AAAEALAGVNKCreLARVILVRLRELVSPNDgTNMERLAAYFTDALQGLLDGAAT--AGGGQSKQglggggcyREEHHQVDVLAAFQLLQDMSPYVKFG 98 
                 678888876554449***********8887669*****************98322..22222222111111113344599******************* PP

        GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                 h+taNq Ileav +++rvHi+D+di++G+QW++L+qaL sR++gpp  +lRiT++++  sg  s  +++etg+rL+ fA+++g pf+f+    ++ e++
  PIN11390.1  99 HFTANQGILEAVTHDRRVHIVDYDIMEGVQWASLMQALVSRKDGPPtpHLRITALSRGGSGrrSFGSIQETGRRLTAFAASIGQPFSFHQCRLDADETF 197
                 ******************************************776556*********888898999************************999999*** PP

        GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsleaklpreseerikvEr 287
                 ++ +L++ +gEal++n++l+l ++  ++ ++     ++L+  k+l+P+++++ve+e+   +++ F+ rf+++l++ysa++dslea++p +s +r+ vEr
  PIN11390.1 198 RPTTLKLVRGEALIINCMLHLPHFSYRTPDSI---ASFLSGSKTLNPRLITLVEEEIGPtSDGGFVGRFMDSLHHYSAIYDSLEAGFPMQSLARALVER 293
                 ************************85555554...59*******************8877999************************************ PP

        GRAS 288 ellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvSaWr 374
                 ++lg++i+  +a   ++r    e+ ++W ++l++ GF+p+++s  + +qaklll  ++ dgy+vee  s+ lvlgWk+r+L+s+S W+
  PIN11390.1 294 VFLGPRITGSLARIYRARG--VEEEGSWGQWLGALGFRPMNISFANHCQAKLLLGLYN-DGYKVEELtSNKLVLGWKSRRLLSASIWT 378
                 **************99965..55669*******************************9.******876999****************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
MAAAEALAGV NKCRELARVI LVRLRELVSP NDGTNMERLA AYFTDALQGL LDGAATAGGG  60
QSKQGLGGGG CYREEHHQVD VLAAFQLLQD MSPYVKFGHF TANQGILEAV THDRRVHIVD  120
YDIMEGVQWA SLMQALVSRK DGPPTPHLRI TALSRGGSGR RSFGSIQETG RRLTAFAASI  180
GQPFSFHQCR LDADETFRPT TLKLVRGEAL IINCMLHLPH FSYRTPDSIA SFLSGSKTLN  240
PRLITLVEEE IGPTSDGGFV GRFMDSLHHY SAIYDSLEAG FPMQSLARAL VERVFLGPRI  300
TGSLARIYRA RGVEEEGSWG QWLGALGFRP MNISFANHCQ AKLLLGLYND GYKVEELTSN  360
KLVLGWKSRR LLSASIWTSQ DSDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-151GRAS family protein