PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN11542.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 236aa MW: 26074.9 Da PI: 6.168

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN11542.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.3	0.00025	86	108	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H PIN11542.1 86 FSCNYCRRKFYSSQALGGHQNAH 108 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MMPPNYNNIE SEDESEVASN ISIQEISQES KNTSSCLEDY PLSHHQETVP VTLDLTLGIK 60 GCDSELKGSG EPASTVSNHP PTSRVFSCNY CRRKFYSSQA LGGHQNAHKR ERTLAKRAMR 120 MGMFSDRYAS LASLPLHGSA FRSLGIEAHS SMHQQVLQNS ERPLHGIRNS GARFVDQGYF 180 GLPMYVEYDE AELSWPGSFR QIEGLQGNPD SGQGSHINFV TTAPPDSSLP DLNLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66140.1	1e-47	C2H2 family protein