PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN11557.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 301aa MW: 34605.5 Da PI: 5.7129

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN11557.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.8	4e-13	195	246	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P++ + ++ + a+i A+e++++L+ PIN11557.1 195 QRMTHIAVERNRRKQMNEHLRVLRSLMPSS---YVQRGDQASIIGGAIEFVRELE 246 79**************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MEKEGNYAGN FHGLDYNSLE VHSHHQEDLI MKPNIGETSI EDHNNNQMVD YMLNNPTPPV 60 PQPSSNFCGS NSFDKLSFAD VMQFADFGPK LALNQSKTGE EESGIDPVYF LKFPVLNDHN 120 KVQDEHNHHL SLMGSQSFGE NQEREDKDDH NEIRVHEENM RILGDNLEKN PLMEGNKGKR 180 KRPRSVKTSE EVESQRMTHI AVERNRRKQM NEHLRVLRSL MPSSYVQRGD QASIIGGAIE 240 FVRELEQLLQ CLESQKRRRL YGDSQRPTGD PSMAVQQHQQ PQPPLMFPND QTKLVEYETG 300 L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	196	207	RMTHIAVERNRR
2	256	260	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	2e-66	bHLH family protein