PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN11686.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 207aa    MW: 23446.1 Da    PI: 10.3444
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN11686.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.33.3e-09132172954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++++P       +Kl+ a++L +Av+Y+k L
  PIN11686.1 132 ARHRRERISQRIRILQRMVPGG-----TKLDTASMLDEAVHYLKFL 172
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MNMDFNLMDS SSHNKTVKFA QLPDGHYLES PESSDLEFPG GSLIRFRSAY YSITPSHIIQ  60
ETKSPPFLQN TKNSEDFACT SLSLRKRDSM EVMREMMFRM AMMQPVQIDP ESVKPPKRKN  120
VRISKDPQSV AARHRRERIS QRIRILQRMV PGGTKLDTAS MLDEAVHYLK FLKKQVQTLE  180
QAAPGNRPTL MAAAGLFPGV GSVQMLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.13e-34bHLH family protein