PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN11881.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 251aa MW: 28026.2 Da PI: 9.2332

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN11881.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	23.5	1.4e-07	142	163	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H PIN11881.1 142 FCEICGKGFKRDANLRMHMRAH 163 6*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MSFVGDIRRT PAATKPPGGG DPSVPLMNLS AVQSRMDNLQ KFLSDSVKSN TLLGQPQMDM 60 VSSEIASAIH QIIVNGAALL SSSPSLSSSY AIENKDEKEK GLQNPEKSVV NPKVEIQLDD 120 DVDDYDIIEL DAVELLAEHV HFCEICGKGF KRDANLRMHM RAHGNQYKTP EALAKPEKSG 180 DLIGRKTRFS CPYVGCNRNK QHKKFRPLKS AICVKNHFKR SHCPKMYSCT RCNKKSFSVY 240 MSLPRPIIIY Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.3	1e-46	C2H2 family protein