PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN11896.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

DBB

Protein Properties

Length: 240aa MW: 26918.6 Da PI: 5.3381

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN11896.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.8	1.9e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lCe+C +e H H++ PIN11896.1 4 QCDVCEKAPATVICCADEAALCEKCDVEVHAAnklaskHQR 44 7*****************************65667777765 PP
2	zf-B_box	26.9	9.7e-09	53	94	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + + C+ ++ek + +fC +++ l+C+dC + +H H PIN11896.1 53 KLPPCDICQEKTAFIFCVEDRALFCKDCDEPIHAAnsraanH 94 6789*****************************545556666 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MKIQCDVCEK APATVICCAD EAALCEKCDV EVHAANKLAS KHQRLLLQCL SNKLPPCDIC 60 QEKTAFIFCV EDRALFCKDC DEPIHAANSR AANHQRFLAT GIRVALGTGC NKDNLKSHIE 120 PKPPKSSPQQ IGLKTPSQHV SAITSPSWGV DELLQFSDYE SSDKKEHLEF NELDWLTDMN 180 IFSEQVPQEA LAAAEVPQLP MSQPNYTIFH RQPKYHTAHK KPRMEIPDDD EEYFTVPDLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	2e-95	DBB family protein