PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN11928.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 875aa MW: 100627 Da PI: 6.4191

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN11928.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.4	4.2e-27	69	154	2	88
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 fYn+YA+ vGF+vrk+ ++sk +g++++r+f+Cs++g+r+++k++ ++ +++r+etrtgC a+++v+++ +gk+ vt++e eHnHe PIN11928.1 69 FYNRYAELVGFTVRKDWVNRSKVHGRVMSRKFTCSRQGHRKKDKRD-VNVKKHRKETRTGCLAHMVVTRQPNGKYLVTQFEAEHNHE 154 9****************************************999.999**********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 875 aa Download sequence
MDIDEGEVVM THEEHEDVRT SNNLDLNVEQ DCRSPKPSNV NGFLSGRSSK HEVLRLGTEF 60 ESDEQAYGFY NRYAELVGFT VRKDWVNRSK VHGRVMSRKF TCSRQGHRKK DKRDVNVKKH 120 RKETRTGCLA HMVVTRQPNG KYLVTQFEAE HNHEDVNLSK AEKLLEELPF SGKGDSTEVS 180 ETDSMKNSEI QSKLSFQLLG IRFFPPENLD DLQIDDEIFL SSGRTRNMKE GDAAHLMYYF 240 HRQHFVNPSF FYSVQLDIDD KVSNIFWADD NMIMEYGHFG DVVCLDTSCT RNTSSRPFVQ 300 FVGLNNHRQV VIFGAAFLYD ESVNSFKWLV RTFVEGMSGK KPKFILSDQD ATVVQAIHAV 360 LPETSHCICA WQMYLIALKH LHHVVKEYDS FAVDFRSCIF GHEQEEDFIQ AWDSMLERHG 420 LRHNAWLRWM FREKEKWAVA YGRNTFFVER NGSHLVELLS DKLRNYLGPD IDVLQFFMLF 480 ESVVNEQRYR ELESTFDMRR HAPVLMANAV LLKHPSEAYT PKAFEVFQRE YEKSLNVVIN 540 KCGERDSRFD YKAKTYGKSR DFLVIYNSLD GTVSCNCMKF EHVGFLCSHA LKVLDNQNIK 600 VVPSYYILKR WTKDARILPA GENHGYTEDN NRKIIASRYK DLCRNIIKIS ARAAESDPAF 660 EFAARQLDEV MQGIERILNF KSFEEAKGNG ASVNELADVG LDRNEFEGQD VDVLKGPVET 720 ESMIPDKDPL NHCDEQIPCA NGGLNVRPSP PETVLSVACA PSTYISSPSP TPSLSPLTQG 780 LYTIEANHMV QSMYQASNLT INQQPNPNMY DPPNFYSNQH HSPSHAQFLQ ESLIRNQFQD 840 PMSNGTQLKP VMDDSQQQHS SSFMHYSHRY RASGV

Sequence ? help Back to Top

Protein Sequence Length: 875 aa Download sequence

MDIDEGEVVM THEEHEDVRT SNNLDLNVEQ DCRSPKPSNV NGFLSGRSSK HEVLRLGTEF  60
ESDEQAYGFY NRYAELVGFT VRKDWVNRSK VHGRVMSRKF TCSRQGHRKK DKRDVNVKKH  120
RKETRTGCLA HMVVTRQPNG KYLVTQFEAE HNHEDVNLSK AEKLLEELPF SGKGDSTEVS  180
ETDSMKNSEI QSKLSFQLLG IRFFPPENLD DLQIDDEIFL SSGRTRNMKE GDAAHLMYYF  240
HRQHFVNPSF FYSVQLDIDD KVSNIFWADD NMIMEYGHFG DVVCLDTSCT RNTSSRPFVQ  300
FVGLNNHRQV VIFGAAFLYD ESVNSFKWLV RTFVEGMSGK KPKFILSDQD ATVVQAIHAV  360
LPETSHCICA WQMYLIALKH LHHVVKEYDS FAVDFRSCIF GHEQEEDFIQ AWDSMLERHG  420
LRHNAWLRWM FREKEKWAVA YGRNTFFVER NGSHLVELLS DKLRNYLGPD IDVLQFFMLF  480
ESVVNEQRYR ELESTFDMRR HAPVLMANAV LLKHPSEAYT PKAFEVFQRE YEKSLNVVIN  540
KCGERDSRFD YKAKTYGKSR DFLVIYNSLD GTVSCNCMKF EHVGFLCSHA LKVLDNQNIK  600
VVPSYYILKR WTKDARILPA GENHGYTEDN NRKIIASRYK DLCRNIIKIS ARAAESDPAF  660
EFAARQLDEV MQGIERILNF KSFEEAKGNG ASVNELADVG LDRNEFEGQD VDVLKGPVET  720
ESMIPDKDPL NHCDEQIPCA NGGLNVRPSP PETVLSVACA PSTYISSPSP TPSLSPLTQG  780
LYTIEANHMV QSMYQASNLT INQQPNPNMY DPPNFYSNQH HSPSHAQFLQ ESLIRNQFQD  840
PMSNGTQLKP VMDDSQQQHS SSFMHYSHRY RASGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-100	FAR1 family protein