PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN12090.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

DBB

Protein Properties

Length: 211aa MW: 23462.1 Da PI: 6.3801

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN12090.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	26.7	1.2e-08	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ ++++ ++ fC+ ++ lC++C + H+ H+ PIN12090.1 4 QCDVCGKEGASVFCTADEAALCKNCDSRVHNAnklaskHS 43 7*****************************7666666665 PP
2	zf-B_box	29.8	1.2e-09	54	92	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 e + C+ ++e ++ lfC++++ llC++C +H+ Ht PIN12090.1 54 ESPQCDICQERRALLFCQEDRALLCRECDIPIHRAneHT 92 6789*****************************768876 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MKIQCDVCGK EGASVFCTAD EAALCKNCDS RVHNANKLAS KHSRFSLLNP RAKESPQCDI 60 CQERRALLFC QEDRALLCRE CDIPIHRANE HTKKHNRFLL TGVKISAAAS SYQTAISPTG 120 SKSETEINIS VTNEVNYQPT STANCSESSS NPWRDNEQSQ PMSQQGAEST SSISEYLMET 180 LPGWHVDDLL EPSSHYGLYN DINKSNICNR N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39070.1	3e-67	DBB family protein