PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN12106.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 202aa MW: 23838.3 Da PI: 10.2187

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN12106.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.5	1.1e-16	18	65	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll +++ ++G g W++++ + g++R++k+c++rw++yl PIN12106.1 18 KGAWTKEEDILLRNCIDKYGEGKWHLVPLRAGLNRCRKSCRLRWLNYL 65 79********************************************97 PP
2	Myb_DNA-binding	43.4	7.9e-14	71	115	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg +Tt+E +l+++++k+ G++ W +Ia +++ gRt++++k++w+++ PIN12106.1 71 RGHFTTDEVDLIIRLHKLQGNR-WPLIAGRIP-GRTANDVKNFWNTH 115 899*****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MEGLRDTMES NIPKGVRKGA WTKEEDILLR NCIDKYGEGK WHLVPLRAGL NRCRKSCRLR 60 WLNYLRPTNK RGHFTTDEVD LIIRLHKLQG NRWPLIAGRI PGRTANDVKN FWNTHIQKKI 120 IKKTTFSTYR NIIRPQPHFP ALHRLRERFI TDHQQNSEEK QENKEPPSSS GEEVDECIRW 180 WTKLLQTTDE NIGDCANLRS IC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	4e-60	MYB family protein