PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN12140.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 821aa MW: 94897.3 Da PI: 7.0701

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN12140.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	88.1	1.2e-27	64	151	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYAk++GF++++++s++sk+++e++++++ Cs++g + e++ ++r++++++t+Cka+++vk+++dgkw+++++++eHnHel p PIN12140.1 64 SFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKLACSRYGVTPESEGG---SSRRSSVKKTDCKASMHVKRKRDGKWYIHEFVKEHNHELLP 151 5*************************************9999877...889999******************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 821 aa Download sequence
MVDFEDNVEG VVEGIGLNMV DVADGAQNRD QVSSCPRRDI LGIEGDNFEP HDGIEFESHE 60 AAYSFYQEYA KSMGFTTSIK NSRRSKKTKE FIDAKLACSR YGVTPESEGG SSRRSSVKKT 120 DCKASMHVKR KRDGKWYIHE FVKEHNHELL PALAYHFRIH RNVKLAEKNN IDILHAVSER 180 TRKMYVEMSR QSGGSQASCL NKDEFDPQFD RGRYLALEEG DAQVMLEYFV KIQKENPSFF 240 YAIDLNEEQR VRNLFWVDAK NRKDYISFND VVFFDTSYIK SNEKMPIALF LGVNHHFQPM 300 LLGCALLADE TKPTFVWLMK TWLRAMGGQA PKAIISDQEN QLKSAFDEVF PCSRHCFALW 360 HIFERIPETL AHVLKQHENF MKKFNKCIFK SLTDEEFDLR WWKMVSGFEL QDNEWVHSIY 420 VDRKKWVPTF MRDTFLAGLS TLQRSESVNS FFDKYIHKKI NLKEFVRQYG AILQNRYEEE 480 DMADFDTWHK QPALKSPSPW EKQMSTIYTH AIFRKFQVEV LGVVGCHPKK EKEDGGNVIF 540 RVDDCEKNEN FVVSWNEARS EVSCSCLMFE YKGFLCRHSM IVLQICGLSS IPTQYILKRW 600 TKDAKNRQAV VEGTERIQTR VQRYNDLCKR AIELGEEGSL SEENYTIACR ALVEALKNCV 660 NVNNRNVVEY SSNSVGIRSA EEENHFHQAT KTNKKRNANK KRKLQPEPEA VVIDAQDSLQ 720 QMENLSSEGI TLNGFYGSQQ HVHGMLNLME PPHDAYYVGQ QTMQGLGQLN SIASSHDSFY 780 GAQQSMPGLG HLDFRQPAFT YGMQDEHNVR PTQLHGTARH A

Sequence ? help Back to Top

Protein Sequence Length: 821 aa Download sequence

MVDFEDNVEG VVEGIGLNMV DVADGAQNRD QVSSCPRRDI LGIEGDNFEP HDGIEFESHE  60
AAYSFYQEYA KSMGFTTSIK NSRRSKKTKE FIDAKLACSR YGVTPESEGG SSRRSSVKKT  120
DCKASMHVKR KRDGKWYIHE FVKEHNHELL PALAYHFRIH RNVKLAEKNN IDILHAVSER  180
TRKMYVEMSR QSGGSQASCL NKDEFDPQFD RGRYLALEEG DAQVMLEYFV KIQKENPSFF  240
YAIDLNEEQR VRNLFWVDAK NRKDYISFND VVFFDTSYIK SNEKMPIALF LGVNHHFQPM  300
LLGCALLADE TKPTFVWLMK TWLRAMGGQA PKAIISDQEN QLKSAFDEVF PCSRHCFALW  360
HIFERIPETL AHVLKQHENF MKKFNKCIFK SLTDEEFDLR WWKMVSGFEL QDNEWVHSIY  420
VDRKKWVPTF MRDTFLAGLS TLQRSESVNS FFDKYIHKKI NLKEFVRQYG AILQNRYEEE  480
DMADFDTWHK QPALKSPSPW EKQMSTIYTH AIFRKFQVEV LGVVGCHPKK EKEDGGNVIF  540
RVDDCEKNEN FVVSWNEARS EVSCSCLMFE YKGFLCRHSM IVLQICGLSS IPTQYILKRW  600
TKDAKNRQAV VEGTERIQTR VQRYNDLCKR AIELGEEGSL SEENYTIACR ALVEALKNCV  660
NVNNRNVVEY SSNSVGIRSA EEENHFHQAT KTNKKRNANK KRKLQPEPEA VVIDAQDSLQ  720
QMENLSSEGI TLNGFYGSQQ HVHGMLNLME PPHDAYYVGQ QTMQGLGQLN SIASSHDSFY  780
GAQQSMPGLG HLDFRQPAFT YGMQDEHNVR PTQLHGTARH A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein