PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN12164.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family Nin-like
Protein Properties Length: 328aa    MW: 37382.3 Da    PI: 5.1504
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN12164.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK83.32.4e-26155205252
      RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 +k++s +++s+yF++pi++AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl
  PIN12164.1 155 SKKLSRKTISEYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLVSL 205
                 689********************************************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MEKTEYSPNM GWSNCNNQAY IAKEEYDDVF SFPSQLPPLD FSFSTGWDFG MQEAVFDSIP  60
PAEMLLSDPL YNPPLDLTQN NSSSALNIPD VHVCISGTAI WDETRTGVLD QVQPQQPQLI  120
FRNNENGTIM VNDELLPVVI EKKRQAQVKN STSSSKKLSR KTISEYFYMP ITQAAKELNV  180
GLTLLKKRCR ELGIRRWPHR KLVSLQTLIN NVQELGKEEG EDKLKKSIEI LEQEKKLMEE  240
SPDLQLEDKT KRLRQACFKA NYKKRKLMGI TTTNHSSTPK SAAATTYNHP LMASEISVNN  300
CFDHDDVDEE LKYFLSDCFS SSSSDLMF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.16e-43Nin-like family protein