PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN12175.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 514aa    MW: 58637.4 Da    PI: 9.8201
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN12175.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS380.22.5e-1161415112374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++lL+ cA+av+++d + a+++L++++++a+p+gd mqRla yf+ +L+ar+a+s++++y al   +ts    s++l+a++++  ++P+ k+s++ aN+
  PIN12175.1 141 RTLLTLCAQAVATDDRRTANEFLKQIRQHATPTGDGMQRLALYFADGLEARMAGSGTRIYTALLNMPTS---ASDVLKAYHIYLATCPFKKISNFFANK 236
                 789************************************************************999998...89************************* PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 +I++  e+ +++Hi+Df+i +G+QWp++lq L+sR++gpp+lR+Tg++ p +g   ++++eetg+rLa++Ae+++vpf+fn+ +a+++e+++le+L+++
  PIN12175.1 237 TIMNLSENVTKLHIVDFGILYGFQWPCFLQRLSSRAGGPPKLRVTGIDFPCPGfrPSQRVEETGRRLARYAETFKVPFQFNA-IAQKWETIKLEDLNID 334
                 **************************************************99999***************************.7*************** PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 ++E+l+Vn+ ++ ++llde+v ++s+r+ vL+l+++++P v+++   +  +n++ F +rf eal +ys+ fd+l+a +pre  er+ +Er ++g+e++n
  PIN12175.1 335 KDEVLVVNCLYRFKNLLDETVMVNSPRNIVLNLIRKMNPAVFILGIVNGAYNAPFFITRFREALFHYSSYFDMLDAIIPREIPERMLLERIVFGKEAMN 433
                 *************************************************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 v+ace aer er et+++W+ r ++aGF+++pl+++++k a+  ++  + + + v+e+ ++l++gWk+r ++++S+Wr
  PIN12175.1 434 VIACEAAERLERPETYKQWQVRNMRAGFEQLPLNDEIMKIARNKVKSSYHKDFVVDEDGQWLLQGWKGRIMYALSSWR 511
                 *************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 514 aa     Download sequence    
MQFKKGVKEA SKFLPDDGSL VVDLSFDERA RKDPVFKVEK KMDNEDFVDV SRGKKNPYRG  60
SIGMQEERSN KQSAVYSEST LSSDMFDKVL LCSGGKNESD LRKALNEVTK SAPQNDQSKG  120
SNSGKNGGKR KGGKRNVVDM RTLLTLCAQA VATDDRRTAN EFLKQIRQHA TPTGDGMQRL  180
ALYFADGLEA RMAGSGTRIY TALLNMPTSA SDVLKAYHIY LATCPFKKIS NFFANKTIMN  240
LSENVTKLHI VDFGILYGFQ WPCFLQRLSS RAGGPPKLRV TGIDFPCPGF RPSQRVEETG  300
RRLARYAETF KVPFQFNAIA QKWETIKLED LNIDKDEVLV VNCLYRFKNL LDETVMVNSP  360
RNIVLNLIRK MNPAVFILGI VNGAYNAPFF ITRFREALFH YSSYFDMLDA IIPREIPERM  420
LLERIVFGKE AMNVIACEAA ERLERPETYK QWQVRNMRAG FEQLPLNDEI MKIARNKVKS  480
SYHKDFVVDE DGQWLLQGWK GRIMYALSSW RPTY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein