PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN12179.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 87aa    MW: 9687.84 Da    PI: 9.1821
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN12179.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.74.2e-111359347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     +WT+ E + + +a + + ++   +W+ +ar +g gRt++++k ++ ++
       PIN12179.1 13 SWTAKENKAFEKALAVFDKDtpdRWDNVARAVG-GRTPEEVKRHYETL 59
                     7********************************.***********876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MASSSMTQGS GRSWTAKENK AFEKALAVFD KDTPDRWDNV ARAVGGRTPE EVKRHYETLI  60
EDIKCIESGH VPFPKYRTTG GGSNMPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.19e-39MYB_related family protein