PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN12182.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 94aa    MW: 10878.4 Da    PI: 10.2581
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN12182.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.83.3e-101257244
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     g+WT++E +l+ +a +++  +   +W  +ar +g g++ +++k ++
       PIN12182.1 12 GSWTPQENKLFEKALARFDRDtpdRWQNVARAVGGGKSVEEVKRHY 57
                     79*****************99************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MASSSLSSRR PGSWTPQENK LFEKALARFD RDTPDRWQNV ARAVGGGKSV EEVKRHYEIL  60
IEDLRRIESG HVPIPNYKNT SVEEEKRLLK LLKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.11e-31MYB_related family protein