PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN12238.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 211aa    MW: 23100 Da    PI: 4.9587
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN12238.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2538.4e-174392255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                 y GVr ++ +g+Wv+eIr p     r   r++lg++ tae+Aa+a++ a+++++g
  PIN12238.1 43 LYIGVRMRS-WGKWVSEIRQP-----RmkSRIWLGTYSTAEMAARAHDVAALSIKG 92
                699***998.**********8.....446**********************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MAAPLPSAAK SPSTTTAAVE SKQNPEKIKS KKRARDIGTK HPLYIGVRMR SWGKWVSEIR  60
QPRMKSRIWL GTYSTAEMAA RAHDVAALSI KGDSAILNFP HLRDSLPRPA SLSPRDVQDA  120
AAKAAAMEEL YLLDSPSCAE AEELGEIIEL PSLEGSHDSS KSGTEFPFVD SEEGWLPPPW  180
WAVDTDFFGD YFSDVMAGGG SGFESMQLWD N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.15e-47ERF family protein