PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN12246.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 332aa MW: 36556.3 Da PI: 7.1776

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN12246.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13	0.00019	197	235	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq PIN12246.1 197 RKEKLGDRITALHQLVSPF-----GKTDTASVLSEAIGYIRFLQ 235 6678889999999999998.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MMAGNPNWWS INSMHPQSHQ FLYDNSSTSD HHHPHQNQDF PVKSWSQFLI GGDEERFGGG 60 LFQQQKKLEN WEDQVLNLNP SFRVPVADVK QEVAQSTTCQ LYHEDDQFQH NKSSNSWLHS 120 HNQVLPVSPP TSCITSILNF SGGTGGKAAT TTAAVAQGKN HHHNQDHSSE CNSTSSGGVT 180 KKARVQQSSA QPALKVRKEK LGDRITALHQ LVSPFGKTDT ASVLSEAIGY IRFLQGQIEA 240 LSSPYMRNGS TVHQQHSVQE RNCLFSEESG QFLNHDHMGM EGRAPSKQDS QSRGVKDLRS 300 RGLCLVPISC TQNVGNDNGA DYWAPAALGG GF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29100.1	8e-66	bHLH family protein