PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN12289.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 189aa    MW: 21422.8 Da    PI: 6.7819
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN12289.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.13.6e-28115175158
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                 ldDgy+WrKYGqK++ g ++prsYYrC+++   gC ++k+v+rs++dp ++e+tY+geH++
  PIN12289.1 115 LDDGYSWRKYGQKDILGFKYPRSYYRCAYShgqGCLATKQVQRSNDDPFTFEVTYRGEHTC 175
                 59**************************998999*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MESESLKERK ALENEITKGM EQVKQLRASS SGNEESALER MLTSYEEALL ILQEIASDEQ  60
GQSVMSLSSD APGPSKDSNI ISIPSRVNTY RRREAPPVWT NQIRVTSNDK YETALDDGYS  120
WRKYGQKDIL GFKYPRSYYR CAYSHGQGCL ATKQVQRSND DPFTFEVTYR GEHTCIGQAH  180
VAAPQRRPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.11e-39WRKY family protein