PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN12338.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 245aa    MW: 27294.2 Da    PI: 6.2497
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN12338.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.71.8e-12281071499
                 T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 + l++p  f +++g +   +k + l+ +sg s ev+l  +++ g+++l+kGW+eF +   +  g  +vF+++g+s+f   v +f++
  PIN12338.1  28 DSLRIPAVFRQRYGDS--LPKSVFLKVPSGSSLEVEL--TQSNGETWLQKGWQEFKERYSIGFGHLLVFQYNGNSQF--DVLIFDT 107
                 5589******999877..7888***************..999999****************************9999..9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MATTGPGREG FPATAPKFFK IIWDPQADSL RIPAVFRQRY GDSLPKSVFL KVPSGSSLEV  60
ELTQSNGETW LQKGWQEFKE RYSIGFGHLL VFQYNGNSQF DVLIFDTTAV EIEYPFDTNH  120
DGGKGHKRAS DQMPDIVGSG TGSDDSVVFL GETATSKNGV GRGETQKDSD RTESDVCMEI  180
LNNTPPRQQD RSKSRHCDGY HSGHVPNCSM KLDRSNSDLD FQNLKPKLKK ECRDGGSQYS  240
DRLQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.15e-22B3 family protein