PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN12385.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 222aa    MW: 24944.1 Da    PI: 6.892
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN12385.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.52.3e-1360106455
                 HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 +h e+Er+RR+++N++f  Lr ++P+ +      K++Ka+ L  A+ YI +Lq
  PIN12385.1  60 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYITELQ 106
                 799***********************66......*****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MQIDFSGATS RAIISHPHSV ESEHSDVEAS CKEETVGLLE DKRPRKRGRK PANGREEPLN  60
HVEAERQRRE KLNQRFYALR AVVPNISKMD KASLLGDAIA YITELQRKLK DMESEKERLG  120
SVSREPSVSE ANQYTEMENQ DSTIDIETVN NEITVRVSCP LNSHPASRII QAIKDAEATI  180
VDAKMASGTE RVFHTFVVKS LGPDRLTKEK LIEAFSHMSK SS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14250KRPRKRGRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46510.15e-73bHLH family protein