PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN12418.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 706aa MW: 81579.6 Da PI: 9.0037

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN12418.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.5	4e-22	157	245	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHn.Hela 90 kfYneYA+e+GFs+rk++ +k +g+i++r f+C ++g+r+++k++ ++ +++r+etr gC a++ ++ ++ gk++v +++ +H+ H+l+ PIN12418.1 157 KFYNEYAREAGFSIRKHTVHKD-ITGKIIDRSFCCACQGHRQKDKRD-VNIKSHRPETRKGCPAMMSINGRYIGKYKVVNFVAKHTgHNLV 245 6*************999987.8999*************999.9**********************************757775 PP

Sequence ? help Back to Top
Protein Sequence Length: 706 aa Download sequence
MKLDRTFLGL ELDIDNRFFS GTLLAIRTGS SAPKSYSISC CTVGITPRVK LTEKESSTLT 60 ILHNGNTGIA QGKTWRRKRL TKREEKLIRT LQEMDINNCD NFTPRRKLEF ISNDAIKEKH 120 DHLDDSKSPI IESHSAILEE KIPKIGMEFD SEKAAYKFYN EYAREAGFSI RKHTVHKDIT 180 GKIIDRSFCC ACQGHRQKDK RDVNIKSHRP ETRKGCPAMM SINGRYIGKY KVVNFVAKHT 240 GHNLVSPSKT HLLRSLRNIN VAQTSQADDI DSSGIAPKAG FALMAKQRTV EMKIGDTGGV 300 LEYLQQRQLD DPNFFYAIQI DEDDLIANIL WVDAQMMADY AHFGDVVCFD TTYRKNKEGR 360 PFALFDGVNH HKQTIVFGAA LIYDETTSTF IWLFDTFARA MSGKQPQTIL TDQDAAMAKA 420 LAIKWPKTYH RLCIWHIYQN AAMHLSHVFT HFVSFSKDFS SCIYDYEEEE EFLNAWQEML 480 EKYGLQSNKW LERMFKIREK WALVYGRQIF CADLTTTQRS ESMKSVLKRY HNLLQFFNHI 540 DRLIDDRRYE ELKADLRTCH STPVSSFPVE ILKHAASIYT HEVFELFQDE VRKTYDSTVE 600 LYDQSGEILE YKVTPYKRHY QHRVLFEPSQ GKVSCSCKKF EFAGILCLHA LKVLSLKNIV 660 KIPELYIKKR WTKKAKTNVV KIQSSGLLAE LVGPMNEKEE KKMIGI

Sequence ? help Back to Top

Protein Sequence Length: 706 aa Download sequence

MKLDRTFLGL ELDIDNRFFS GTLLAIRTGS SAPKSYSISC CTVGITPRVK LTEKESSTLT  60
ILHNGNTGIA QGKTWRRKRL TKREEKLIRT LQEMDINNCD NFTPRRKLEF ISNDAIKEKH  120
DHLDDSKSPI IESHSAILEE KIPKIGMEFD SEKAAYKFYN EYAREAGFSI RKHTVHKDIT  180
GKIIDRSFCC ACQGHRQKDK RDVNIKSHRP ETRKGCPAMM SINGRYIGKY KVVNFVAKHT  240
GHNLVSPSKT HLLRSLRNIN VAQTSQADDI DSSGIAPKAG FALMAKQRTV EMKIGDTGGV  300
LEYLQQRQLD DPNFFYAIQI DEDDLIANIL WVDAQMMADY AHFGDVVCFD TTYRKNKEGR  360
PFALFDGVNH HKQTIVFGAA LIYDETTSTF IWLFDTFARA MSGKQPQTIL TDQDAAMAKA  420
LAIKWPKTYH RLCIWHIYQN AAMHLSHVFT HFVSFSKDFS SCIYDYEEEE EFLNAWQEML  480
EKYGLQSNKW LERMFKIREK WALVYGRQIF CADLTTTQRS ESMKSVLKRY HNLLQFFNHI  540
DRLIDDRRYE ELKADLRTCH STPVSSFPVE ILKHAASIYT HEVFELFQDE VRKTYDSTVE  600
LYDQSGEILE YKVTPYKRHY QHRVLFEPSQ GKVSCSCKKF EFAGILCLHA LKVLSLKNIV  660
KIPELYIKKR WTKKAKTNVV KIQSSGLLAE LVGPMNEKEE KKMIGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-132	FAR1 family protein