PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN12523.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 212aa    MW: 23262.2 Da    PI: 4.358
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN12523.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.43.1e-172978255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +ykGVr +k +g++v+eIr p++   r r++lg+++tae+Aa+a +a   +l+g
  PIN12523.1 29 KYKGVRKRK-WGKYVSEIRLPNS---RERIWLGSYDTAEKAARAFDASLFCLRG 78
                8*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MAETPPAAAR PYAAASSSNA GEPRLNEVKY KGVRKRKWGK YVSEIRLPNS RERIWLGSYD  60
TAEKAARAFD ASLFCLRGPN AKFNFPDEPP NIAGGEMLTP AEIQSVAQHY ANTYSGGSSN  120
QPQPPARPLE LEDTSPSSNS EGAGPIESID WSFLDMLDSN TEDNAGRVSD FGLYDDVYNM  180
SPHYTHDGND NDDNDDDHGD GGHVPSNFLW NF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13137KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.11e-45ERF family protein