PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN12584.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 255aa    MW: 27242.3 Da    PI: 6.4232
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN12584.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.74.4e-1691139255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+G+r  +++g+Wv+eIr+p++   ++r++lg++ ++e+Aa+a++ a+++l+g
  PIN12584.1  91 TYRGIR--SRSGKWVSEIREPKK---TTRIWLGTYPSPEMAAAAYDVAALALKG 139
                 69***6..678*********854...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MSDSPHHPHN MSQRHHPPQP NQTSFTSPPS SPPPPPSPPP PLPPPSPPHL ESSEALPSPK  60
KVKKTTTTTT TTSATSSGGS SSRPTGGKHP TYRGIRSRSG KWVSEIREPK KTTRIWLGTY  120
PSPEMAAAAY DVAALALKGP DTLLNFPDRV NTYPVPGSPS PQDIRKAATS AAALMKPERG  180
DEATVGGQPP ANDESASNVD MLSSEHEFID EEALFHMPNL LKDMAEGMLV SPPRTAAPPS  240
DDSPENSDAE ILWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.13e-54ERF family protein