PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN12618.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 248aa    MW: 28404 Da    PI: 10.4295
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN12618.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3491.1e-151196195
                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
          B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                ffkv++p   + +  l lp +f+++ +++  +s   t+++ +  +W++k+  r++ g + +++GW +Fv+ +gL  gD+v F+++g+  f  +  
  PIN12618.1 11 FFKVMIP--GFHE-KLNLPPDFCKKVKQE--KSEWATVKS-RKGTWKIKV-CRNYEGLMCFKDGWANFVNRHGLSIGDTVFFEHIGHLHF--NAL 96
                7888844..4444.488******999766..444566666.5569*****.355555599***********************9997555..444 PP
2B359.55.9e-19146235192
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+ +++p+++++ + +++p +f ++h  +k +   +tl+d++ ++W+vkl+++ k+++   ++kGW +F  +n+Lk+gD++vF l+  s+++ 
  PIN12618.1 146 FILTMKPHHAHRPSAVTIPAEFGRAHLRNK-S--SITLRDPHAKKWQVKLRIQTKPKArWRMSKGWLDFYASNNLKDGDVCVFNLNCGSKKST 235
                 7789999999999*************6554.3..5***************99555544499***********************996644433 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MEEKLAKTMR FFKVMIPGFH EKLNLPPDFC KKVKQEKSEW ATVKSRKGTW KIKVCRNYEG  60
LMCFKDGWAN FVNRHGLSIG DTVFFEHIGH LHFNALVFDP TACEKEFVVE FKKGNGGVNG  120
NYNPRNTKGE PAKECSTSCK NPNPHFILTM KPHHAHRPSA VTIPAEFGRA HLRNKSSITL  180
RDPHAKKWQV KLRIQTKPKA RWRMSKGWLD FYASNNLKDG DVCVFNLNCG SKKSTTVLMD  240
VQIFPAPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.16e-20B3 family protein