PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN12619.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 251aa    MW: 29021.5 Da    PI: 10.252
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN12619.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.42.2e-171194191
                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
          B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefe 91
                ffkv++p   + +  l lp  f+e+ +++  +s +  +  ++  +W+v+l  ++++++ + l++GW +Fv+ +gL  gDfv+F+++g+  f+
  PIN12619.1 11 FFKVMMP---GFHEKLNLPPAFCEKVKQE--KS-EWAIVKSRKGTWKVRL--CRNGEGlMCLKDGWANFVNKHGLSIGDFVLFEHIGHLHFN 94
                7888855...3344588******999755..34.5666677888******..777777699***********************99975553 PP
2B354.22.5e-17148234188
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                 f  ++ p++++k++ +++p +f +++++ k++s  +tl+d+  ++W vkl + ++++ r+ +++GW +F  +n+Lk+gD++vF +++rs
  PIN12619.1 148 FAVTMQPHHAHKRSKVTIPAEFSRTNNIFKNSS--VTLRDPCKKQWLVKLLVqKQGRIRCRMERGWYDFYVSNKLKDGDVCVFNMVRRS 234
                 67789999******************8777665..***************884444555*************************88653 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MEGKLATIRH FFKVMMPGFH EKLNLPPAFC EKVKQEKSEW AIVKSRKGTW KVRLCRNGEG  60
LMCLKDGWAN FVNKHGLSIG DFVLFEHIGH LHFNAFVFDP SACEREFVME FDNEHEGANG  120
NYHPRNTNEQ PTATKESRPS SKNKNPHFAV TMQPHHAHKR SKVTIPAEFS RTNNIFKNSS  180
VTLRDPCKKQ WLVKLLVQKQ GRIRCRMERG WYDFYVSNKL KDGDVCVFNM VRRSIKSGTV  240
LMDVQIFAAP P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31680.13e-20B3 family protein