PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN12684.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family FAR1
Protein Properties Length: 156aa    MW: 18135.7 Da    PI: 9.2102
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN12684.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1354.7e-1189155268
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkv 68 
                  Y++YA+  GFsvrk  + +   n+e   ++f C + g +++++++++ +  ++++ +t+Cka+l++
  PIN12684.1  89 LYCDYAHAKGFSVRKGDQCYFPCNNELQAKEFECLCGGAKDKRRSHNRISVYQKPTIKTKCKARLRI 155
                 59*******************9**********************99888999************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MHLFARERDK RENGIRNKQA TLLLLLSFAW RENYEEVETT NKYKGQSTFV ESSLPKSQEV  60
QFMSSIIDEL ESRLAVGQFV KSVEDAYFLY CDYAHAKGFS VRKGDQCYFP CNNELQAKEF  120
ECLCGGAKDK RRSHNRISVY QKPTIKTKCK ARLRIG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130134KRRSH