PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN12760.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 569aa MW: 61642.7 Da PI: 7.0816

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN12760.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.3	1e-30	305	363	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ PIN12760.1 305 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGNHNHP 363 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MDRGWGLTVE NSDRVGFFGN KPGFGFNLSP RLEHRSSGGL IMFPVSSSGK EEEVAVSPPT 60 GGERRVVLGE VDFFAEKKKP INGVVKKEED SHAEASSCRK MAVNTGLQLV TANTGSDQST 120 IDDGVTCDAE DKRARHELAQ LQAELERMNA ENQRLRGMLT QVSSNYSTLQ IHMMTLMQQQ 180 QNSKTDSTQE QEILGRKSEE KKHENGGPLV PRQFLDLAPG AATQMEDEQA NSSSEERTLS 240 GSPHNNTEPS RNKRIGREDS PESESWAPNK ASKLNSTKPV DQSPEATMRK ARVSVRARSE 300 APMISDGCQW RKYGQKMAKG NPCPRAYYRC TMAVGCPVRK QVQRCAEDRT ILITTYEGNH 360 NHPLPPAAMA MASTTSAAAN MLLSGSMPSA DGLMNPNFLA RTILPCSSNM ATISASAPFP 420 TVTLDLTQST NPLQLQRPSP QFQVPFPQNF APVQTPSVPQ VFGQALYNQS KFSGLQMSQE 480 VNDVPQMQGQ TSQHPQLQHQ LPAHPLFADT LSAATAAITA DPNFTAALAA AISSIIGGSQ 540 ANNANNNPST PNNTTNVNTS NSNNSFPGN

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MDRGWGLTVE NSDRVGFFGN KPGFGFNLSP RLEHRSSGGL IMFPVSSSGK EEEVAVSPPT  60
GGERRVVLGE VDFFAEKKKP INGVVKKEED SHAEASSCRK MAVNTGLQLV TANTGSDQST  120
IDDGVTCDAE DKRARHELAQ LQAELERMNA ENQRLRGMLT QVSSNYSTLQ IHMMTLMQQQ  180
QNSKTDSTQE QEILGRKSEE KKHENGGPLV PRQFLDLAPG AATQMEDEQA NSSSEERTLS  240
GSPHNNTEPS RNKRIGREDS PESESWAPNK ASKLNSTKPV DQSPEATMRK ARVSVRARSE  300
APMISDGCQW RKYGQKMAKG NPCPRAYYRC TMAVGCPVRK QVQRCAEDRT ILITTYEGNH  360
NHPLPPAAMA MASTTSAAAN MLLSGSMPSA DGLMNPNFLA RTILPCSSNM ATISASAPFP  420
TVTLDLTQST NPLQLQRPSP QFQVPFPQNF APVQTPSVPQ VFGQALYNQS KFSGLQMSQE  480
VNDVPQMQGQ TSQHPQLQHQ LPAHPLFADT LSAATAAITA DPNFTAALAA AISSIIGGSQ  540
ANNANNNPST PNNTTNVNTS NSNNSFPGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-140	WRKY family protein