PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN12924.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 257aa MW: 29694.2 Da PI: 4.9602

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN12924.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.7	4.3e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ + G +W+++++ g++R++k+c++rw +yl PIN12924.1 14 KGPWTAEEDKKLINFIISNGQCCWRAVPKLAGLRRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	50.9	3.5e-16	72	111	6	47
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + E++l +d++++lG++ W++Ia++++ gRt++++k++w+++ PIN12924.1 72 EAEEQLVIDLHARLGNR-WSKIAARLP-GRTDNEIKNHWNTH 111 67*************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MGRQPCCDKL GVKKGPWTAE EDKKLINFII SNGQCCWRAV PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL NEAEEQLVID LHARLGNRWS KIAARLPGRT DNEIKNHWNT HIKKKLLKMG 120 IDPVTHEPFH KETKENDQNS NSQAQGNNIQ ESDKDHQVQL LPTDQSSSSD ESNLYENDPL 180 ISNLFKDDPP HDQVEVPWEF LLPAEENFNN FCTNSWEENC PSWLLDCQDF GIHDFDFDCI 240 NMEMNNDLDS LEMGNSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22680.1	3e-93	MYB family protein