PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN12999.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 228aa    MW: 25178.1 Da    PI: 8.7462
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN12999.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.35.1e-203078355
         AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa+++l+g
  PIN12999.1 30 FRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARSLRG 78
                8*******.**********883....5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MRRGRAAGRQ VAVVPGGEAN GSGGSKEMRF RGVRKRPWGR YAAEIRDPWK KTRVWLGTFD  60
SAEDAARAYD AAARSLRGQK AKTNFPLPPS GNVFPEFNPQ NPNQQQINHN PNDPFMDSRY  120
YSQDQQIIAQ QRPTSSGMSS TVESFSGPRQ LPPPHPIIQQ QRRHPRSPPM VPDDCRSDCD  180
SSSSVVDDAE CDIASSSCKK TLPFDLNMPP PVDAAADLDE LACTALRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.12e-29ERF family protein