PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13013.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 302aa    MW: 35170.5 Da    PI: 9.905
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13013.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.12e-183479147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ede+l ++v+q+G+ +W++Ia++++ gR++k+c++rw++ 
       PIN13013.1 34 RGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQ-GRSGKSCRLRWFNQ 79
                     899*****************************.***********996 PP
2Myb_DNA-binding57.82.5e-1886129146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r ++++eE+e+l+ a++ +G++ W++I+r ++ gRt++ +k++w+ 
       PIN13013.1  86 RRPFSEEEEERLLAAHRIHGNK-WALISRLFP-GRTDNAVKNHWHV 129
                      679*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MFKDISFRHI NLKLPMDETT CTGGSNDDSR TCPRGHWRPA EDEKLRQLVE QYGPQNWNSI  60
AEKLQGRSGK SCRLRWFNQL DPRINRRPFS EEEEERLLAA HRIHGNKWAL ISRLFPGRTD  120
NAVKNHWHVI MARKQREKSK LCGKRLTHQD HNHAISDPKS PTNYIFRRKN SRIQEDYGSR  180
ISFINGGVFD LHTQSKDKPF SCWPNNLSCY SSVVNSNHQN NFSIFSAYGD SNLAFETLNK  240
KRDISNTFNY LEYGIMNREL KSTVGENTLS FDKARTSMEQ LLEEKSVQKK DVPFIDFLGV  300
GR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.19e-65MYB family protein