PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13048.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 259aa    MW: 28883.6 Da    PI: 4.977
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13048.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH376.3e-1276122354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+ErrRR+riN  + +Lr l+P++     +K++Ka+ L ++++ +k+L
  PIN13048.1  76 KSHSEAERRRRERINAHLMTLRGLVPNN-----EKMDKATLLAEVINQVKQL 122
                 58*************************8.....8*************99999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MYFENPYSLN FESDWGDLLN QSSQNVSGRT ENWGSGSKPV KESLVLDGEK GELEETSGRM  60
GKKSGASETK MIAALKSHSE AERRRRERIN AHLMTLRGLV PNNEKMDKAT LLAEVINQVK  120
QLKATATQAN EGLHIPMDAD EVEVEILKNN EDDGSFLLRA SLCCNYKPDL MYDLKQAIND  180
LPVQVLKCEL STLGGRLKSV FLITTREGDS DSVAGQELIV SSVRMALSNI LDKVTASAEY  240
DQELFYPQKR RRLSCFDAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18287ERRRRE
2249253KRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25710.15e-33bHLH family protein