PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13077.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ZF-HD
Protein Properties Length: 252aa    MW: 27900.4 Da    PI: 8.8389
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13077.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.23.4e-3248103359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                  ++ Y+eClkNhAa++Gg+++DGCgEfmps ge+gt +alkCaAC+CHRnFHR+e++ 
   PIN13077.1  48 RISYRECLKNHAANIGGNVTDGCGEFMPS-GEDGTLEALKCAACNCHRNFHRKEHHG 103
                  689*************************9.999********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MSLPGEDKDM RMQSLAYNIN SLENPQENKP RPSDPNSGGS KSKPTNPRIS YRECLKNHAA  60
NIGGNVTDGC GEFMPSGEDG TLEALKCAAC NCHRNFHRKE HHGEPTAMMH PLQLPPPLPS  120
PSLSQHRISG GAVHWSSMVH PMKMAAFGGG GGGGSAGTDS SSEELNFNAF HSNTVAPPPP  180
QFVTKKRFRT KFTSEQKERM LEFAEKLGWR IPREDDTEVQ RFCAEVGVKR QVFKVWMHNN  240
KSSSKKNIPQ EF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.12e-59ZF-HD family protein