PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13078.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 98aa    MW: 11350.8 Da    PI: 9.8198
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13078.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.11.1e-091357345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +WT    +++ +a +++ ++   +W+ Iar +g g+++++++ ++ 
       PIN13078.1 13 SWTMKQNKQFEEALARYDKDtpdRWHNIARAVG-GKSAEEVRRHYE 57
                     7********************************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    
MASSSMTSSR GSSWTMKQNK QFEEALARYD KDTPDRWHNI ARAVGGKSAE EVRRHYEVLE  60
KDIMQIETDQ VPIPNYRAIP TNSRGYANEH RLLKNLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.21e-36MYB_related family protein