PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13199.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 249aa    MW: 27221.2 Da    PI: 9.1723
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13199.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.72.4e-09178225455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++iN ++  L+el+P +    +k    a++L + +++++ Lq
  PIN13199.1 178 SHSLAERARREKINARMKLLQELVPGC----NKISGTAMVLDEIINHVQALQ 225
                 8*************************9....89999*************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MEPEATPPQF RSGDVGFGFD EIHGLISVPP VTGSSSFTAL LELPPPQAVE LLVKEDFPAK  60
HMPPPIFPSN IDLIDRASKF SAFAKADNSP ENNTILSSPM KLDVVKQEPL DSDSQPNSIS  120
PAVSNQSLKS GKRKEREKKV KESNRKSKKV VANEASADGG EKLPYVHVRA RRGQATDSHS  180
LAERARREKI NARMKLLQEL VPGCNKISGT AMVLDEIINH VQALQRQVEV RLGTSLPLIL  240
LFDKSVGLC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1133149RKEREKKVKESNRKSKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.21e-56bHLH family protein