PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN13216.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

SBP

Protein Properties

Length: 360aa MW: 38110.1 Da PI: 9.0742

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN13216.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	139	1.4e-43	73	148	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC++dls+ak y++rhkvC +hsk+p+v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+ PIN13216.1 73 RCQVEGCKVDLSDAKAYYSRHKVCGMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKP 148 6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MEKGSSSSSS SSPAGGGADS LNGLKFGKKI YFEGVGSGLQ PKTEGGPSPA AAPPSSPAKK 60 GRTGVLQGGQ PPRCQVEGCK VDLSDAKAYY SRHKVCGMHS KSPKVIVAGL EQRFCQQCSR 120 FHQLPEFDQG KRSCRRRLAG HNERRRKPPP GSLLSPRYGS LCSSMFDNPS RSGGFVMDFS 180 AYSPLTGRDS WPNNTSERGL GNQSATTGKY QLPYQGNSQN PLSGLVQGTT SRPSYSDPVV 240 SSNECFNGVS DSTGALSLLS NQPWGSRTRS SSLGVNNFLG TNGSAVVQPS VNSGAAIGQF 300 ACPSWGFKDN EMPPDLGLGQ TSQPADSQYT GELGLAQPSE GQFHELDHSR GYDSSVHWSL

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MEKGSSSSSS SSPAGGGADS LNGLKFGKKI YFEGVGSGLQ PKTEGGPSPA AAPPSSPAKK  60
GRTGVLQGGQ PPRCQVEGCK VDLSDAKAYY SRHKVCGMHS KSPKVIVAGL EQRFCQQCSR  120
FHQLPEFDQG KRSCRRRLAG HNERRRKPPP GSLLSPRYGS LCSSMFDNPS RSGGFVMDFS  180
AYSPLTGRDS WPNNTSERGL GNQSATTGKY QLPYQGNSQN PLSGLVQGTT SRPSYSDPVV  240
SSNECFNGVS DSTGALSLLS NQPWGSRTRS SSLGVNNFLG TNGSAVVQPS VNSGAAIGQF  300
ACPSWGFKDN EMPPDLGLGQ TSQPADSQYT GELGLAQPSE GQFHELDHSR GYDSSVHWSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	1e-61	SBP family protein