PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13231.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HSF
Protein Properties Length: 333aa    MW: 37851.4 Da    PI: 4.7291
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13231.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.92.1e-35491402102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl k++e++ed++++ +isws+ +nsf+v+d+++f++++Lp+yFkh nf+SF+RQLn+YgF+kv+ ++         weF+++ F  g+k+ll++ik
    PIN13231.1  49 FLIKTFEMVEDPSTDAVISWSRAKNSFIVWDSHKFSTTLLPRYFKHGNFSSFIRQLNTYGFRKVDPDR---------WEFANEGFLGGQKHLLKTIK 136
                   9********************999*****************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+++
    PIN13231.1 137 RRRN 140
                   *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MESVKVKVEE EYTTTCGGAT AGGGGALPSS SSSSPQPMEG LHEVGPPPFL IKTFEMVEDP  60
STDAVISWSR AKNSFIVWDS HKFSTTLLPR YFKHGNFSSF IRQLNTYGFR KVDPDRWEFA  120
NEGFLGGQKH LLKTIKRRRN VIQSVTQQNG SSCVELGQYG MEEELERLKR DCNLLMAEIM  180
KLKQQHQNST QQILAMEERI HNTERKQQQI MSFLAKAFRS PLFVQQYMDK FGQKGDDRQI  240
EIGHKRRLTM SPSVENLQED VLYTSEEENL FSAVLDDESS SDVKGLSAET MPLSGDRMWE  300
RFLNDDAIVG DEGEEDLEVE DLVAKTPEWD GMN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1132138LKTIKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.11e-114HSF family protein