PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN13301.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 441aa MW: 48408.4 Da PI: 8.8649

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN13301.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99	3e-31	181	237	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 Dg+nWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkve++ d+++ ei+Y+geHnh+k PIN13301.1 181 DGHNWRKYGQKQVKGSEYPRSYYKCTYPSCPVKKKVEKTL-DGQIAEIVYKGEHNHPK 237 9*************************************.*************85 PP
2	WRKY	99.4	2.3e-31	365	422	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++prsYYrCt ++C+v+k ver++ed +++++tYeg+Hnh PIN13301.1 365 GDGYRWRKYGQKVVKGNPYPRSYYRCTNPKCNVRKYVERTSEDRETFITTYEGRHNHG 422 5********************************************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MEINQTEKIV IAKPVACRPG ISNLKSFSKL LVSAVNASPP AAFSDDAVAV IKPRTLRLKP 60 VCNDDLVGAE VLSSAACRPS KQDPETNIMS TVVYKPVAKV VSKATVSLLA NLGGCGIGPT 120 REIPPADAPF QPSNEVKHQT DLTSDFHQAQ CEPKANAIRE NSEDDNKSLL LPNNADRPSY 180 DGHNWRKYGQ KQVKGSEYPR SYYKCTYPSC PVKKKVEKTL DGQIAEIVYK GEHNHPKPQP 240 LNQKPADDAG RNEKKSSSFK GREVGSEDQN NIESSGISTF CGAVAPVNEP FAAAMCNASV 300 STSNNSMGLS GECEEVSESL EAEGDGFKSK RMKCDNQLLK GRTAGEASSE SRTVVEKKTD 360 SEIIGDGYRW RKYGQKVVKG NPYPRSYYRC TNPKCNVRKY VERTSEDRET FITTYEGRHN 420 HGMPIKRTIT ESAKTSTRNK S

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MEINQTEKIV IAKPVACRPG ISNLKSFSKL LVSAVNASPP AAFSDDAVAV IKPRTLRLKP  60
VCNDDLVGAE VLSSAACRPS KQDPETNIMS TVVYKPVAKV VSKATVSLLA NLGGCGIGPT  120
REIPPADAPF QPSNEVKHQT DLTSDFHQAQ CEPKANAIRE NSEDDNKSLL LPNNADRPSY  180
DGHNWRKYGQ KQVKGSEYPR SYYKCTYPSC PVKKKVEKTL DGQIAEIVYK GEHNHPKPQP  240
LNQKPADDAG RNEKKSSSFK GREVGSEDQN NIESSGISTF CGAVAPVNEP FAAAMCNASV  300
STSNNSMGLS GECEEVSESL EAEGDGFKSK RMKCDNQLLK GRTAGEASSE SRTVVEKKTD  360
SEIIGDGYRW RKYGQKVVKG NPYPRSYYRC TNPKCNVRKY VERTSEDRET FITTYEGRHN  420
HGMPIKRTIT ESAKTSTRNK S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	1e-79	WRKY family protein