PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13368.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 497aa    MW: 57816.8 Da    PI: 4.5026
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13368.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS102.75.3e-321274961374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l +lLl+ Aea++++++el + + +r+ ++++p g  ++R+  y+ + L+++                 ++++ ++   a+k+f++++P+ kf+h++ N
  PIN13368.1 127 LSHLLLAYAEAMDNQETELPEVISQRIIQRVNPVGGIVERVLYYMFQNLNKKPDY-------------LKQESIKNFYLAFKAFYQIFPYGKFAHFVEN 212
                 579******************************************9999876554.............3333488999********************* PP

        GRAS 100 qaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvlvakrledlelee 193
                  aIlea+ ++ e +  iDf+i++G+QW+++++a+  ++    ++Ri  ++ +e++     + + eet++rL +  ++ g++++ + +  ++le++ +++
  PIN13368.1 213 FAILEAMPKDvEIINLIDFEIGEGIQWASFMEAIKYQR---KEIRIISIKFNEEDesipLRWKFEETKRRLCDHGASHGLKVKVKEVGLQDLESV-MKN 307
                 ********998999********************9754...56999999998888777778899**********************999999999.9** PP

        GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvks.........lsPkvvvvveqeadh.nse..sFlerflealeyysalfdsleaklpres. 279
                 ++  ++   + n+ + l ++ +     ++   e+L l k+         +   +++  + ++   n++  s+   +   + +y al++s+e ++p++  
  PIN13368.1 308 IDYGRKSWYIFNCNVGLPHMGR--IRNKNDVFEFLTLAKNflynvtcyyTTKGIITYGDGDVRQsNTTckSYSSFLDGIFAHYQALLESMEFNFPSHLg 404
                 *******************983..333333455555555411111112144568999999976644435466666667789**************9998 PP

        GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrve.eesgslvlgWkdrpLvsvSaWr 374
                 e+r+++E  ++++ i+++     +++ e+++++ + +  l+ + ++  +lse+   +ak l+++      g r+e e+++++vl W++ ++v v++W+
  PIN13368.1 405 EARTSLECLFVAPYISSW-----DRKWEEMKQFDELELELG-VSLEGWNLSETSLVEAKELVKESVksPYGVRIEgEKKNEMVLRWNSVQMVRVCCWK 496
                 99*******999999876.....222356666666655554.458999**************9987333456666999*******************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 497 aa     Download sequence    
MSLYDIYQSS ELHSNPFCMD DGEGKNAFSP PFSPDISSSM QYLETILSDE FHPDSAIHDI  60
SPLIDDFHID FDELDCIFNG DMPKPLDEYS DEWNLYDAMN VCEPPTDMMT SIVLPFEGKE  120
VDNQLFLSHL LLAYAEAMDN QETELPEVIS QRIIQRVNPV GGIVERVLYY MFQNLNKKPD  180
YLKQESIKNF YLAFKAFYQI FPYGKFAHFV ENFAILEAMP KDVEIINLID FEIGEGIQWA  240
SFMEAIKYQR KEIRIISIKF NEEDESIPLR WKFEETKRRL CDHGASHGLK VKVKEVGLQD  300
LESVMKNIDY GRKSWYIFNC NVGLPHMGRI RNKNDVFEFL TLAKNFLYNV TCYYTTKGII  360
TYGDGDVRQS NTTCKSYSSF LDGIFAHYQA LLESMEFNFP SHLGEARTSL ECLFVAPYIS  420
SWDRKWEEMK QFDELELELG VSLEGWNLSE TSLVEAKELV KESVKSPYGV RIEGEKKNEM  480
VLRWNSVQMV RVCCWKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.16e-16GRAS family protein