PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13369.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 511aa    MW: 58108.1 Da    PI: 4.5383
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13369.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS1488.8e-461475102373
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  +lL +  ea+++g++ela+ +++ +++  sp g++m+R+   + +  ++               ++ +e++ ++ +aa+k++++  P  +f+h+taN+
  PIN13369.1 147 LHLLKAYGEAMENGEKELAKVIVTSINNKTSPLGTTMERVGYNLFQSREKE-------------GEHLREESIKNMVAAFKVLYQSLPNGRFAHFTANS 232
                 68999999********************************98766543333.............3334444588999********************** PP

        GRAS 101 aIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 aIle+v ++ +++Hi+Dfd+++ +QWp+L+++++ +++    l++T + s+e+        e t++rL   A ++gv+++++    +r+edl  e +r+
  PIN13369.1 233 AILESVPNDaDTIHIVDFDMGEAVQWPPLIETFSRKQK---ALKLTSMISEEKCtsCCWDFEDTKKRLLTHAGQCGVNLHIEE---RRIEDLGGELMRM 325
                 ******99889**********************99755...5*****9998877788899********************998...8********9999 PP

        GRAS 197 kp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPk...vvvvveqe....adhnsesFlerflealeyysalfdsleaklpres....... 279
                 k+  +E ++ n+++ l ++ +++  ++ + +e+Lk+  +l ++   +v++ + +    ++  s +++  f + l++y a+f+sle+k+ + +       
  PIN13369.1 326 KRrgKEWIVFNCMVGLPHMGRKR--SRGAVNEFLKVAEELVANfegIVILGDGDqvgeSKSPSCNYASYFDNLLKHYQAVFESLEKKFESLEknspvyl 422
                 9999***************8433..3334699********9976668999998843223334449*******************999544332336666 PP

        GRAS 280 .eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                  ++ri vE ++l++  + v   +         ++ k ++   e+ +k  +ls++  ++ak ++++ + + ++v+ +++++vl Wk+ pLv vS W
  PIN13369.1 423 sDARIAVESVFLAPFMCPVSWFQDWV------EMTKIQNHRAESQLKGRKLSDESLAEAKQMVNERE-NSHKVKMRQNEMVLQWKETPLVRVSTW 510
                 68999999998888877665555544......4556666667888999*******************.559************************ PP
Sequence ? help Back to Top
Protein Sequence    Length: 511 aa     Download sequence    
MMQSEPLMPS WPSFNFTSLN HNIPYDQEMD FFGVDDLDLS CSFASPVESS LISSNSIDTA  60
MFSNEFFPEE SCVISPTSYV PTIFSDEFLD LENLCNEIQI CSPMEGDEWS PCLSSELSQN  120
SILCPLVDMS LVLPGDEMEV DDQLSLLHLL KAYGEAMENG EKELAKVIVT SINNKTSPLG  180
TTMERVGYNL FQSREKEGEH LREESIKNMV AAFKVLYQSL PNGRFAHFTA NSAILESVPN  240
DADTIHIVDF DMGEAVQWPP LIETFSRKQK ALKLTSMISE EKCTSCCWDF EDTKKRLLTH  300
AGQCGVNLHI EERRIEDLGG ELMRMKRRGK EWIVFNCMVG LPHMGRKRSR GAVNEFLKVA  360
EELVANFEGI VILGDGDQVG ESKSPSCNYA SYFDNLLKHY QAVFESLEKK FESLEKNSPV  420
YLSDARIAVE SVFLAPFMCP VSWFQDWVEM TKIQNHRAES QLKGRKLSDE SLAEAKQMVN  480
ERENSHKVKM RQNEMVLQWK ETPLVRVSTW M
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1345351GRKRSRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.12e-20GRAS family protein