PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13463.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 272aa    MW: 30789.3 Da    PI: 5.4412
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13463.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.55.5e-172168148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+eEd++lvd ++q G gtW+  ++  g+ R++k+c++rw +yl
       PIN13463.1 21 RGAWTAEEDKILVDFITQNGHGTWRNLPKLAGLPRCGKSCRLRWTNYL 68
                     89******************************99************97 PP
2Myb_DNA-binding44.63.3e-1474119148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      r+++++ E+  +++++  lG++ W++Ia++++ gRt++++k+ w+++l
       PIN13463.1  74 RDPFSPNEENTIIHLHSTLGNK-WAAIASHLP-GRTDNDIKNLWNSHL 119
                      789*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MGKKRDKKGR KPCCEKEGIR RGAWTAEEDK ILVDFITQNG HGTWRNLPKL AGLPRCGKSC  60
RLRWTNYLRP DIRRDPFSPN EENTIIHLHS TLGNKWAAIA SHLPGRTDND IKNLWNSHLR  120
KRLSSNVINQ TSTSSKSVDT KCDFPSACQN ENVRRLEDEP CLASPQMLLN EPSEGDHFLR  180
FWNSEVEESF QSGNVNMSES QMSLFTKVES SPGGTSFSEM DDQKAEELAT YSDSSKSNEF  240
DDSLDAMMTM LLDFPVGGDD VEFLQGSNNQ LY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.17e-77MYB family protein