PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13661.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 254aa    MW: 28282.3 Da    PI: 6.6273
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13661.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.91e-1763113155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr +  +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a+++++g
  PIN13661.1  63 PVYRGVRMRA-WGKWVSEIREPKK---KSRIWLGTFANPEMAARAHDVAALAIKG 113
                 68*****998.**********854...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MAEPPHSEPE SSGHSTDSRP RPKPILKRTR QTNDPHEVNQ SGEKRSKSNK SSAYCNNNGS  60
KHPVYRGVRM RAWGKWVSEI REPKKKSRIW LGTFANPEMA ARAHDVAALA IKGNSAILNF  120
PEISDLLPRP ITCSPRDVQA AATKAAHMDH LHLHHNHQRR DSDSPSMTSS SSSSLSDDVS  180
TAPEELGEIV ELPSLGTGYE SVDPTRVDFI LGQDVGWDYY NHPALDSLED CGFFLAENDM  240
TSGSFEDLFW KHHC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-53ERF family protein