PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13672.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 309aa    MW: 34571.1 Da    PI: 9.3218
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.14e-1368112147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +W+++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
       PIN13672.1  68 RESWSEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 112
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MVSVYPNPPP EQNFTNFNGY YMGGDPARIP GMDGSDSKLL QTTVGNVGLG VDDPNKKVRK  60
PYTITKSRES WSEQEHDKFL EALQLFDRDW KKIEAFVGSK TVIQIRSHAQ KYFLKVQKSG  120
TSEHVPPPRP KRKATHPYPQ KAPKVVPQAT GPLQSSAALL EPGYSVRPDS MSMLRNPVPS  180
VPLSSWTYNV VPTGCFSNAS KDDTGLASIN NNYSSSSNES TPRVWSSKGM HPEVEAKQCS  240
RTRVMPDFAE VYSFIGSVFD PDASNHLQRL KKMEPIDVET VLMLMKNLAV NLVSPEFEDH  300
RRLLSSYYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.21e-100MYB_related family protein