PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13680.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 316aa    MW: 34762.3 Da    PI: 6.5117
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13680.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY992.9e-31141199259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D+++WrKYGqK++kgs++pr+YYrC+++ gC+++k+ver+++dp ++++tY+geHnh+
  PIN13680.1 141 SDKWSWRKYGQKPIKGSPYPRGYYRCSTSkGCMARKQVERNRSDPGMFIVTYTGEHNHP 199
                 79************************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MADDWDLHAV VRGFTTTASA AATTSSSAAL TTTCGLPFST FHQDSNFTTS WFQDPFEPRR  60
NTITEDLHDL YKPFFSQKSV ISQQNLPINS PLSQQVVKQR PFSVVNCSKS TSSNNPSSRS  120
SKKRKNHLKR VSHVPAESLN SDKWSWRKYG QKPIKGSPYP RGYYRCSTSK GCMARKQVER  180
NRSDPGMFIV TYTGEHNHPM PTHRNSLAGS TRPKPPENPN SDEPKKPTSS PEMSPAVSLS  240
PAPEKLESSP EDLVEAEDDD DNLSGSNMAL DDDFFAGLEN FAGRDSGDCL SDVFPADLEF  300
PWLDSATATT TSGAGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-70WRKY family protein