PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN13706.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 238aa MW: 28050.6 Da PI: 9.7017

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN13706.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.9	1.4e-19	21	68	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll+++vk++G g+W+ +ar g++R +k+c++rw +yl PIN13706.1 21 KGPWTAEEDKLLIEYVKLHGEGRWNNVARLAGLRRNGKSCRLRWVNYL 68 79********************************************97 PP
2	Myb_DNA-binding	52	1.6e-16	74	118	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ +++++++++G++ W+tIar ++ gRt++++k++w+++ PIN13706.1 74 RGQITPHEETIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 118 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MSWGVMAQNM GWGLIEESWR KGPWTAEEDK LLIEYVKLHG EGRWNNVARL AGLRRNGKSC 60 RLRWVNYLRP DLKRGQITPH EETIILELHA RWGNRWSTIA RSLPGRTDNE IKNYWRTHFK 120 KKGNATSQNQ EKSQARLLRR QQFQQQQQQQ QQQQIDMKMI MSLIEESDKK LPIFTQFKQE 180 IVYPGALEEQ GFPYSISNGY EASSEDMTLW DGLWDLDDFQ GKSTTRANNQ HSLASNFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	3e-80	MYB family protein