PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13771.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 292aa    MW: 33137.1 Da    PI: 9.6068
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13771.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.78.4e-1670115147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg W + Ed +l+++v+++G+ +W+ Ia+++  gR++k+c++rw++ 
       PIN13771.1  70 RGHWRPAEDAKLKELVALYGPQNWNIIAEKLE-GRSGKSCRLRWFNQ 115
                      899*****************************.***********996 PP
2Myb_DNA-binding57.72.6e-18122166147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r ++T+eE+e+l  a+k +G++ W+ Iar ++ gRt++ +k++w+ +
       PIN13771.1 122 RRAFTEEEEERLMAAHKIYGNK-WAMIARLFP-GRTDNAVKNHWHVV 166
                      678*******************.*********.***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MAYADFSFLS INPNFEFSSK KNGDSSIRKI DLNTTLNEEE SQEYSYNVHG LNIKDSNSNI  60
SSGQSKLCAR GHWRPAEDAK LKELVALYGP QNWNIIAEKL EGRSGKSCRL RWFNQLDPRI  120
NRRAFTEEEE ERLMAAHKIY GNKWAMIARL FPGRTDNAVK NHWHVVMARK YREQYRRRKM  180
AQFVFKRIEG NNEISVVNGA SAAIRTESRF GSAQMASGGG NVKGIWAPQG SDLGLFSGPT  240
TNQMISIFNH NKSWDQTNSY YTSELPQLPQ EVSTAEERNA PPFIDFLGVG AL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69560.12e-76MYB family protein