PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13842.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 294aa    MW: 31719.7 Da    PI: 5.564
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13842.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.35.4e-11556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++WT eE+  l+ +++++G g W+tI +          R+  ++k++w+++
       PIN13842.1  5 KQKWTSEEEAALKAGINKYGIGKWSTILKDPEfstvlRARSNVDLKDKWRNL 56
                     79***********************************99***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MGAPKQKWTS EEEAALKAGI NKYGIGKWST ILKDPEFSTV LRARSNVDLK DKWRNLNCMA  60
SGSGSRHRAR VSSKNNQLTA KQDEDITVNS MTVEKDSEVL DATSVATSSE ISEDAGSRKQ  120
ISRLDDLILE AITKLKEPRG SSRPAIAQYI EEHYSSPPDF ERTLAANLKI LTESGRLIKV  180
KHQYRIAPRS ISFAAGKEPQ FLLENGAQKG PSAGTNGVIL LTKAKIDAEL EKMKSMTAEE  240
AAAAAAQAVA EAEAAIAEAE AAAREAEEAE AEAEAAQCFA DAAQKALNCQ TIRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.14e-69MYB_related family protein