PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13854.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 197aa    MW: 20923.4 Da    PI: 4.3467
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13854.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.3e-193182155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                + y+GVr++k++g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+++l+g
  PIN13854.1 31 PVYRGVRRRKSSGKWVSEIREPK----TpNRIWLGTFPTPEMAAVAYDVAALALKG 82
                68*******************94....478***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MSQSPGKKRG GASSVSPPSD GGGSDFSGGR PVYRGVRRRK SSGKWVSEIR EPKTPNRIWL  60
GTFPTPEMAA VAYDVAALAL KGKEAELNFP NSASSLPVPA STSPRDIQAA AAAAAAATGA  120
AADALGGGNV VVETPKSEAE MQPEIIPVVD EFFDEDLIFD LPNVLMNMAQ GMMISPPRIG  180
FEDDENDFEY EDLWSYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.16e-22ERF family protein