PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN13862.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

LBD

Protein Properties

Length: 178aa MW: 19468.8 Da PI: 8.0323

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN13862.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	144.8	2.5e-45	10	108	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC ++C++apyfp e+p+kfanvhk+FGasnv+kll+++++++r+da++sl+yeAear+rdPvyG+vg i+ lq+q+e+l++el+++++ PIN13862.1 10 PCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEISPNQRDDAVNSLAYEAEARVRDPVYGCVGAITFLQRQVERLQKELEAANA 108 7*********************************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence
MASSSSYNCP CAACKFLRRK CMPGCIFAPY FPPEEPQKFA NVHKIFGASN VSKLLNEISP 60 NQRDDAVNSL AYEAEARVRD PVYGCVGAIT FLQRQVERLQ KELEAANADL IRYTCNGIQP 120 SVPMVVPPRQ RAAEFNNSGG RGGGAGGGFY QTPSSYGFPY NYHSSWSDGY NPHGDGNI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63090.2	2e-70	LBD family protein