PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13882.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 90aa    MW: 11148.9 Da    PI: 9.6991
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13882.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.72.3e-073170445
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     +T++E++++ + +k+ G + W++Ia +++ g+ ++++  +w+
       PIN13882.1 31 MTEQEEDIINRMHKLVGDK-WTLIAGRVP-GKKPEEIERFWL 70
                     69***************99.*********.***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MDKKFRQKHP KIRKCCFSEE VSSIEWEFID MTEQEEDIIN RMHKLVGDKW TLIAGRVPGK  60
KPEEIERFWL MRNNEYFKSR RKEEKKRQNC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53200.13e-34MYB_related family protein