PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN14054.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 594aa MW: 65152.9 Da PI: 8.9876

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN14054.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.9	3.7e-05	60	82	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H PIN14054.1 60 FICEICNKGFQRDQNLQLHRRGH 82 89*******************88 PP
2	zf-C2H2	11.6	0.00086	136	158	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + PIN14054.1 136 WKCEKCSKKYAVQSDWKAHSKIC 158 58*****************9876 PP
3	zf-C2H2	11.6	0.00086	258	280	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + PIN14054.1 258 WKCEKCSKKYAVQSDWKAHSKIC 280 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 594 aa Download sequence
MMSEDGIPRG FIQDPNPNPN PNPNPNSNPS KRKRNLPGTP DPDAEVIALS PKSLMATNRF 60 ICEICNKGFQ RDQNLQLHRR GHNLPWKLKQ RTNKEVKKKV YICPEKTCVH HDPSRALGDL 120 TGIKKHYSRK HGEKKWKCEK CSKKYAVQSD WKAHSKICGT REYKCDCGTL FSRKDSFITH 180 RAFCDALAEE SVRFTTPVAA NLNFRNDLIN GGINNLQSSV SSQFSGIFGG LESGSNQVNL 240 DLQKPRLPLW LDNIGNPWKC EKCSKKYAVQ SDWKAHSKIC GTREYKCDCG TLFSRKDSFI 300 THRAFCDALA EESVRFTTPV AANLNFRNDL INGGINNLQS SVSSQFSGIF GGLESGSNQV 360 NLDLQKPRLP LWLDNIGNPG SSNANNFLAS SSSTSLPELV QMASQSQWSA FGGGNVNVAS 420 SSSSRVLKEE DENKGNLSEA INSSLYYTNQ QETNNPQAVA SAPAPMSATA LLQKAAQMGS 480 TRSSGSSIFG SGFGLMSSSN FSNLGNFSSM NQGKADSALN NHQLMASTSA APADHGLLLS 540 DMMPNAKQSQ SLDAENSLTR DFLGVGGNEN RRFLQENELA KFASAMDMSH YSRN

Sequence ? help Back to Top

Protein Sequence Length: 594 aa Download sequence

MMSEDGIPRG FIQDPNPNPN PNPNPNSNPS KRKRNLPGTP DPDAEVIALS PKSLMATNRF  60
ICEICNKGFQ RDQNLQLHRR GHNLPWKLKQ RTNKEVKKKV YICPEKTCVH HDPSRALGDL  120
TGIKKHYSRK HGEKKWKCEK CSKKYAVQSD WKAHSKICGT REYKCDCGTL FSRKDSFITH  180
RAFCDALAEE SVRFTTPVAA NLNFRNDLIN GGINNLQSSV SSQFSGIFGG LESGSNQVNL  240
DLQKPRLPLW LDNIGNPWKC EKCSKKYAVQ SDWKAHSKIC GTREYKCDCG TLFSRKDSFI  300
THRAFCDALA EESVRFTTPV AANLNFRNDL INGGINNLQS SVSSQFSGIF GGLESGSNQV  360
NLDLQKPRLP LWLDNIGNPG SSNANNFLAS SSSTSLPELV QMASQSQWSA FGGGNVNVAS  420
SSSSRVLKEE DENKGNLSEA INSSLYYTNQ QETNNPQAVA SAPAPMSATA LLQKAAQMGS  480
TRSSGSSIFG SGFGLMSSSN FSNLGNFSSM NQGKADSALN NHQLMASTSA APADHGLLLS  540
DMMPNAKQSQ SLDAENSLTR DFLGVGGNEN RRFLQENELA KFASAMDMSH YSRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	1e-101	C2H2 family protein