PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN14068.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 510aa MW: 57654.9 Da PI: 4.9243

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN14068.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.7	3.7e-12	258	300	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +Er+RR+++N+++ Lr l+P+ +Kl+ a+iL A++Y+k+L PIN14068.1 258 VAERKRRKKLNDRLYSLRALVPNI-----TKLDRASILGDAIDYVKEL 300 68*******************7.....7**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MLVQSVIERL RPLVGIKSWD YIVLWKLSND QRCIEWMDCC CAGSENVENG GEELISFEAG 60 SSSLPCRDVI FPHSRITSCD LLDQLPSSMV LDSGVHSQTL LSNQVSWLNY SHNSDSSQET 120 IGTRVLIPLS LGLLELFVTK QVPEDQQVID FIMAQCNLDL PNDISMDKIH LSSSPLNPLQ 180 QLGNNSVFEG PPYAYESNLF TPSIENGFHD VETQSNVMND DSFICENNRS DDSDPNEDED 240 DAKYRRRTGK GPQSKNLVAE RKRRKKLNDR LYSLRALVPN ITKLDRASIL GDAIDYVKEL 300 LKQVKDLQIE LEQHSDNEDA RRTENDDTEN GTKRAPKTAH ENFVNGFDHD KGSSANNNVK 360 PDHNNNEKVQ QMEPQVEVFQ LDGNEFFVKV FCEHKSGGFV RVMEALNSLG LEVTNVNATR 420 HTCLVSSIFK VERKNFDETV QADHVKESLL ELTRNPSRTS TWPIAAADQD QSENGSNIDK 480 DNHNINAHDY TQSVHRSRGG QINTHHRLHH

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MLVQSVIERL RPLVGIKSWD YIVLWKLSND QRCIEWMDCC CAGSENVENG GEELISFEAG  60
SSSLPCRDVI FPHSRITSCD LLDQLPSSMV LDSGVHSQTL LSNQVSWLNY SHNSDSSQET  120
IGTRVLIPLS LGLLELFVTK QVPEDQQVID FIMAQCNLDL PNDISMDKIH LSSSPLNPLQ  180
QLGNNSVFEG PPYAYESNLF TPSIENGFHD VETQSNVMND DSFICENNRS DDSDPNEDED  240
DAKYRRRTGK GPQSKNLVAE RKRRKKLNDR LYSLRALVPN ITKLDRASIL GDAIDYVKEL  300
LKQVKDLQIE LEQHSDNEDA RRTENDDTEN GTKRAPKTAH ENFVNGFDHD KGSSANNNVK  360
PDHNNNEKVQ QMEPQVEVFQ LDGNEFFVKV FCEHKSGGFV RVMEALNSLG LEVTNVNATR  420
HTCLVSSIFK VERKNFDETV QADHVKESLL ELTRNPSRTS TWPIAAADQD QSENGSNIDK  480
DNHNINAHDY TQSVHRSRGG QINTHHRLHH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	245	266	RRRTGKGPQSKNLVAERKRRKK
2	260	267	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	7e-69	bHLH family protein